Bernd Hamann - Publications

Publications Authored, Co-authored, or Co-edited (Appeared or To-appear), also at IDAV Publications


2008

[276] Ahlborn, B.A., Kreylos, O., Shafii, S., Hamann, B. and Staadt, O.G. (2008), Design and implementation of a foveal projection display (pdf), in: Baciu, G., Sun, H. and Wu, E., eds., International Journal of Image and Graphics (IJIG) 8(2), special issue, World Scientific Publishing Company, pp. 243-263.

[277] Bernardin, T., Budge, B.C. and Hamann, B. (2008), Stacked-widget visualization of scheduling-based algorithms, (pdf), to appear in: Hundhausen, C.D. and Telea, A.C., eds., Proceedings of ACM Symposium on Software Visualization 2008 (SOFTVIS08), ACM Press, New York, New York.

[278] Bernardin, T., Cowgill, E.S., Gold, R.D., Hamann, B. Kreylos, O. and Schmitt, A. (2008), Real-time terrain mapping (pdf), to appear in: Hagen, H., ed., Scientific Visualization: Challenges for the Future, IEEE Computer Society Press, Los Alamitos, California.

[279] Billen, M.I., Kreylos, O., Hamann, B., Jadamec, M.A., Kellogg, L.H., Staadt, O.G. and Sumner, D.Y. (2008), A geoscience perspective on immersive 3D gridded data visualization (pdf), Computers and Geosciences 34(9), Elsevier, pp. 1056-1072.

[280] Bremer, P.-T., Pascucci, V. and Hamann, B. (2008), Maximizing adaptivity in hierarchical topological models using extrema trees (pdf), to appear in: Moeller, T., Hamann, B. and Russell, R.D., eds., Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer-Verlag, Heidelberg, Germany.

[281] Deller, M., Agne, S., Ebert, A., Dengel, A., Hagen, H., Klein, B., Bender, M., Bernardin, T. and Hamann, B. (2008), Managing a document-based information space (pdf), in: Bradshaw, J.M., Lieberman, H.A. and Staab, S., eds., Proceedings of 2008 International Conference on Intelligent User Interfaces (IUI 2008), ACM Press, New York, New York, pp. 119-128.

[282] Dillard, S.E., Natarajan, V., Weber, G.H., Pascucci, V. and Hamann, B. (2008), Topology-guided tessellation of quadratic elements (pdf), to appear in: Asano, T., ed., International Journal of Computational Geometry and Applications (IJCGA) 18, special issue, World Scientific Publishing Company.

[283] Feng, Z.X., Hotz, I., Hamann, B. and Joy, K.I. (2008), Anisotropic noise samples (pdf), IEEE Transactions on Visualization and Computer Graphics 14(2), pp. 342-354.

[284] Feng, Z.X., Hotz, I., Hamann, B. and Joy, K.I. (2008), Dense glyph sampling for visualization (pdf), to appear in: Laidlaw, D.H. and Weickert, J., eds., Visualization and Processing of Tensor Fields: Advances and Perspectives, Springer-Verlag, Heidelberg, Germany

[285] Fowlkes, C.C., Luengo Hendriks, C.L., Keraenen, S.V.E., Weber, G.H., Ruebel, O., Huang, M.-Y., Chatoor, S., DePace, A.H., Simirenko, L., Henriquez, C.N., Beaton, A., Weiszmann, R., Celniker, S.E., Hamann, B., Knowles, D.W., Biggin, M.D., Eisen, M.B. and Malik, J. (2008), A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm (pdf), Cell 133(2), ELSEVIER, pp. 364-374.

[286] Gyulassy, A.G., Pascucci, V., Hamann, B. and Bremer, P.-T. (2008), A practical approach to Morse-Smale complex computation: Scalability and generality (pdf), to appear in: Chen, M., Hansen, C.D. and Ma, K.-L., eds., IEEE Visualization 2008, IEEE Transactions on Visualization and Computer Graphics 14(6).

[287] Gyulassy, A.G., Linsen, L. and Hamann, B. (2008), Time- and space-efficient error calculation for multiresolution direct volume rendering (pdf), to appear in: Moeller, T., Hamann, B. and Russell, R.D., eds., Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer-Verlag, Heidelberg, Germany.

[288] Hamann, B. (2008), On curved simplicial elements and best quadratic spline approximation for hierarchical data representation (pdf), to appear in: Papadopoulos, P.E., ed., Computational Fluid Dynamics Journal, special issue, International Society of Computational Fluid Dynamics.

[289] Hart, L.A., Wood, M.W., Wiley, D.F., Hamann, B., Molinaro, M., Meyers, S., Stevenson, F.T. and Storm, W. (2008), BioSafaris: a rationale for educational software on human biology and health in pre-college as an alternative to dissection (pdf), in: Yoshimura, I., Okumura, H. and Hagino, S., eds., Proceedings of Sixth World Congress on Alternatives and Animal Use in the Life Sciences, Alternatives to Animal Testing and Experimentation (AATEX) 14, special issue, Japanese Society of Alternatives to Animal Experiments (JSAAE), Tokyo, Japan, pp. 243-248.

[290] Hlawitschka, M., Weber, G.H., Anwander, A., Carmichael, O.T., Hamann, B. and Scheuermann, G. (2008), Interactive volume rendering of diffusion tensor data (pdf), to appear in: Laidlaw, D.H. and Weickert, J., eds., Visualization and Processing of Tensor Fields: Advances and Perspectives, Springer-Verlag, Heidelberg, Germany

[291] Hotz, I., Feng, Z.X., Hamann, B. and Joy, K.I. (2008), Tensor field visualization using a fabric-like texture on arbitrary two-dimensional surfaces (pdf), to appear in: Moeller, T., Hamann, B. and Russell, R.D., eds., Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer-Verlag, Heidelberg, Germany.

[292] Hotz, I., Sreevalsan-Nair, J. and Hamann, B. (2008), Tensor field reconstruction based on eigenvector and eigenvalue interpolation (pdf), to appear in: Hagen, H., ed., Scientific Visualization: Challenges for the Future, IEEE Computer Society Press, Los Alamitos, California.

[293] Huang, M.-Y., Ruebel, O., Weber, G.H., Luengo Hendriks, C.L., Biggin, M.D., Hagen, H. and Hamann, B. (2008), Segmenting gene expression patterns of early-stage Drosophila embryos (pdf), in: Linsen, L., Hagen, H. and Hamann, B., eds., Visualization in Medicine and Life Sciences, Springer-Verlag, Heidelberg, Germany, pp. 313-327.

[294] Kellogg, L.H., Bawden, G.W., Bernardin, T., Billen, M.I., Cowgill, E.S., Hamann, B., Jadamec, M.A., Kreylos, O., Staadt, O.G. and Sumner, D.Y. (2008), Interactive visualization to advance earthquake simulation (pdf), in: Tiampo, K.F., Weatherly, D. and Weinstein, S.A., eds., Pure and Applied Geophysics 165(3-4), special issue, Birkhaeuser/Springer-Verlag, pp. 621-633.

[295] Lehner, B., Umlauf, G. and Hamann, B. (2008), Survey of techniques for data-dependent triangulations approximating color images (pdf), to appear in: Garth, C., Hagen, H. and Hering-Bertram, M., eds., visualization of Large and Unstructured Data Sets, GI Lecture Notes in Informatics, Vol. ?-?, Gesellschaft fuer Informatik (GI), Bonn, Germany, pp. ?-?.

[296] Lehner, B., Umlauf, G. and Hamann, B. (2008), Video compression using data-dependent triangulations (pdf), winner of the Outstanding Paper Award, in: Xiao, Y. and ten Thij, E.~C.~G., eds., Proceedings of IADIS Multi-conference on Computer Science and Information Systems (MCCSIS) 2008 - International Conference on Computer Graphics and Visualization (CGV) 2008, IADIS Press, IADIS (International Association for Development of the Information Society), Lisbon, Portugal, pp. 244-248.

[297] Linsen, L., Hagen, H. and Hamann, B., eds. (2008), Visualization in Medicine and Life Sciences, ISBN 978-3-540-72629-6, Mathematics and Visualization Series, Springer-Verlag, Heidelberg, Germany.

[298] Natarajan, V., Koehl, P., Wang, Y. and Hamann, B. (2008), Visual analysis of biomolecular surfaces (pdf), in: Linsen, L., Hagen, H. and Hamann, B., eds., Visualization in Medicine and Life Sciences, Springer-Verlag, Heidelberg, Germany, pp. 237-255.

[299] Moeller, T., Hamann, B. and Russell, R.D., eds. (2008), Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, to appear, ISBN 978-3-540-25076-0, Mathematics and Visualization Series, Springer-Verlag, Heidelberg, Germany.

[300] Ruebel, O., Prabhat, Wu, K., Childs, H.R., Meredith, J.S., Geddes, C.G.R., Cormier-Michel, E., Ahern, S., Weber, G.H., Messmer, P., Hagen, H., Hamann, B. and Bethel, E.W. (2008), Application of high-performance visual analysis methods to laser wakefield particle acceleration data (pdf), poster presentation, to appear in: Meyer, J. and Yoo, T.S., eds., IEEE Visualization 2008 - Poster Compendium, IEEE Computer Society Press, Los Alamitos, California.

[301] Ruebel, O., Prabhat, Wu, K., Childs, H.R., Meredith, J.S., Geddes, C.G.R., Cormier-Michel, E., Ahern, S., Weber, G.H., Messmer, P., Hagen, H., Hamann, B. and Bethel, E.W. (2008), High-performance multivariate visual data exploration for extremely large data (pdf), to appear in: Panda, D.K. and Kerbyson, D.J., eds., Proceedings of Supercomputing 2008 (SC08), ACM/IEEE, ACM Press, New York, New York.

[302] Ruebel, O., Weber, G.H., Huang, M.-Y., Bethel, E.W., Biggin, M.D., Fowlkes, C.C., Luengo Hendriks, C.L., Keraenen, S.V.E., Eisen, M.B., Knowles, D.W., Malik, J., Hagen, H. and Hamann, B. (2008), Integrating data clustering and visualization for the analysis of 3D gene expression data (pdf), to appear in IEEE/ACM Transactions on Computational Biology and Bioinformatics.

[303] Ruebel, O., Weber, G.H., Huang, M.-Y., Bethel, E.W., Keraenen, S.V.E., Fowlkes, C.C., Luengo Hendriks, C.L., DePace, A.H., Simirenko, L., Eisen, M.B., Biggin, M.D., Hagen, H., Malik, J., Knowles, D.W., and Hamann, B. (2008), PointCloudExplore 2: Visual exploration of 3D gene expression (pdf), to appear in: Garth, C., Hagen, H. and Hering-Bertram, M., eds., Visualization of Large and Unstructured Data Sets, GI Lecture Notes in Informatics, Vol. ?-?, Gesellschaft fuer Informatik (GI), Bonn, Germany, pp. ?-?.

[304] Schlemmer, M., Hotz, I., Natarajan, V., Hamann, B. and Hagen, H. (2008), A Clifford Fourier transformation for vector field analysis and visualization (pdf), to appear in: Papadopoulos, P.E., ed., Computational Fluid Dynamics Journal, special issue, International Society of Computational Fluid Dynamics.

[305] Shah, N.Y., Dillard, S.E., Weber, G.H. and Hamann, B. (2008), Volume visualization of multiple alignment of large genomic DNA (pdf), to appear in: Moeller, T., Hamann, B. and Russell, R.D., eds., Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer-Verlag, Heidelberg, Germany.

[306] Vanco, M., Hamann, B. and Brunnett, G. (2008), Surface reconstruction from unorganized point data with quadrics (pdf), to appear in Computer Graphics Forum, Eurographics Association.

[307] Weber, G.H., Ruebel, O., Huang, M.-Y., DePace, A.H., Fowlkes, C.C., Keraenen, S.V.E., Luengo Hendriks, C.L., Hagen, H., Knowles, D.W., Malik, J., Biggin, M.D. and Hamann, B. (2008), Visual exploration of three-dimensional gene expression using physical views and linked abstract views (pdf), to appear in IEEE/ACM Transactions on Computational Biology and Bioinformatics 5.

[308] Zawadzki, R.J., Fuller, A.R., Choi, S.~S., Wiley, D.F., Hamann, B. and Werner, J.S. (2008), Improved representation of retinal data acquired with volumetric Fd-OCT: Co-registration, visualization and reconstruction of a large field of view (pdf), in: Manns, F., Soederberg, P.G., Ho, A., Stuck, B.E. and Belkin, M., eds., Ophthalmic Technologies XVIII, Proc. SPIE Vol. 6844, SPIE - The International Society for Optical Engineering, Bellingham, Washington, pp. 68440C-1--68440C-8.